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Oct 7

Integration of Domain Knowledge using Medical Knowledge Graph Deep Learning for Cancer Phenotyping

A key component of deep learning (DL) for natural language processing (NLP) is word embeddings. Word embeddings that effectively capture the meaning and context of the word that they represent can significantly improve the performance of downstream DL models for various NLP tasks. Many existing word embeddings techniques capture the context of words based on word co-occurrence in documents and text; however, they often cannot capture broader domain-specific relationships between concepts that may be crucial for the NLP task at hand. In this paper, we propose a method to integrate external knowledge from medical terminology ontologies into the context captured by word embeddings. Specifically, we use a medical knowledge graph, such as the unified medical language system (UMLS), to find connections between clinical terms in cancer pathology reports. This approach aims to minimize the distance between connected clinical concepts. We evaluate the proposed approach using a Multitask Convolutional Neural Network (MT-CNN) to extract six cancer characteristics -- site, subsite, laterality, behavior, histology, and grade -- from a dataset of ~900K cancer pathology reports. The results show that the MT-CNN model which uses our domain informed embeddings outperforms the same MT-CNN using standard word2vec embeddings across all tasks, with an improvement in the overall micro- and macro-F1 scores by 4.97\%and 22.5\%, respectively.

  • 12 authors
·
Jan 4, 2021

CopySpec: Accelerating LLMs with Speculative Copy-and-Paste Without Compromising Quality

We introduce CopySpec, an innovative technique designed to tackle the inefficiencies LLMs face when generating responses that closely resemble previous outputs. CopySpec identifies repeated sequences in the model's chat history and speculates that the same tokens will follow, enabling seamless copying without compromising output quality or requiring additional GPU memory. To evaluate the effectiveness of our approach, we conducted experiments using five LLMs and five datasets: MT-Bench, CNN/DM, GSM-8K, HumanEval, and our newly created dataset, MT-Redundant. MT-Redundant, introduced in this paper, transforms the second turn of MT-Bench into a request for variations of the first turn's answer, simulating real-world scenarios where users request modifications to prior responses. Our results demonstrate significant speed-ups: up to 2.35x on CNN/DM, 3.08x on the second turn of select MT-Redundant categories, and 2.66x on the third turn of GSM-8K's self-correction tasks. Moreover, we show that CopySpec integrates seamlessly with speculative decoding, yielding an average 49% additional speed-up over speculative decoding for the second turn of MT-Redundant across all eight categories. While LLMs, even with speculative decoding, suffer from slower inference as context sizes grow, CopySpec leverages the expanded context to accelerate inference, making it faster as the context size increases. Our code and dataset are publicly available at https://github.com/RazvanDu/CopySpec.

  • 4 authors
·
Feb 12, 2025

Ensemble Deep Learning Approaches for AI-Altered Video Detection

The increasing accessibility of artificial intelligence has led to a rapid rise in AI-generated videos, making it more difficult to distinguish between real and manipulated content. Many existing detection methods rely on a single model and often struggle to generalize across different types of deepfakes. In this work, we developed a multimodal deepfake detection system that combines both audio and visual analysis using an ensemble of models. The system includes AASIST for audio-based detection, and EfficientNet, XceptionNet, and MesoNet for analyzing visual features in video frames. The pipeline takes a video as input, separates the audio, and extracts face frames using MTCNN. Each model produces a score indicating the likelihood of the input being fake. These scores are then combined using ensemble strategies, including mean averaging and stacking. Mean fusion provides a simple and stable baseline, while stacking uses a trained meta-model to learn how to combine predictions more effectively. Results show that while individual models perform well on the datasets they were trained on, their performance drops when tested on more diverse datasets. The ensemble approach helps improve overall robustness by combining predictions from multiple models, leading to more consistent performance across different types of deepfakes. This suggests that using both audio and visual information together is a more reliable approach for deepfake detection. Our results highlight generalization to unseen manipulations as the central open challenge, with average accuracy around 70%.

  • 6 authors
·
Jul 7